Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CJA_3539 | CJA_3541 | CJA_3539 | CJA_3541 | Conserved hypothetical protein; Identified by match to protein family HMM PF04339. | CBS domain protein; Identified by match to protein family HMM PF00571; match to protein family HMM PF03471; match to protein family HMM PF03741. | 0.485 |
CJA_3539 | exoD | CJA_3539 | CJA_3540 | Conserved hypothetical protein; Identified by match to protein family HMM PF04339. | ExoD; Identified by match to protein family HMM PF06055. | 0.518 |
CJA_3541 | CJA_3539 | CJA_3541 | CJA_3539 | CBS domain protein; Identified by match to protein family HMM PF00571; match to protein family HMM PF03471; match to protein family HMM PF03741. | Conserved hypothetical protein; Identified by match to protein family HMM PF04339. | 0.485 |
CJA_3541 | CJA_3542 | CJA_3541 | CJA_3542 | CBS domain protein; Identified by match to protein family HMM PF00571; match to protein family HMM PF03471; match to protein family HMM PF03741. | Hypothetical protein; Identified by Glimmer3; putative. | 0.592 |
CJA_3541 | CJA_3543 | CJA_3541 | CJA_3543 | CBS domain protein; Identified by match to protein family HMM PF00571; match to protein family HMM PF03471; match to protein family HMM PF03741. | Hypothetical protein; Identified by Glimmer3; putative. | 0.437 |
CJA_3541 | exoD | CJA_3541 | CJA_3540 | CBS domain protein; Identified by match to protein family HMM PF00571; match to protein family HMM PF03471; match to protein family HMM PF03741. | ExoD; Identified by match to protein family HMM PF06055. | 0.728 |
CJA_3541 | guaA | CJA_3541 | CJA_2103 | CBS domain protein; Identified by match to protein family HMM PF00571; match to protein family HMM PF03471; match to protein family HMM PF03741. | GMP synthase, C- domain protein; Catalyzes the synthesis of GMP from XMP. | 0.492 |
CJA_3542 | CJA_3541 | CJA_3542 | CJA_3541 | Hypothetical protein; Identified by Glimmer3; putative. | CBS domain protein; Identified by match to protein family HMM PF00571; match to protein family HMM PF03471; match to protein family HMM PF03741. | 0.592 |
CJA_3542 | CJA_3543 | CJA_3542 | CJA_3543 | Hypothetical protein; Identified by Glimmer3; putative. | Hypothetical protein; Identified by Glimmer3; putative. | 0.558 |
CJA_3542 | exoD | CJA_3542 | CJA_3540 | Hypothetical protein; Identified by Glimmer3; putative. | ExoD; Identified by match to protein family HMM PF06055. | 0.552 |
CJA_3543 | CJA_3541 | CJA_3543 | CJA_3541 | Hypothetical protein; Identified by Glimmer3; putative. | CBS domain protein; Identified by match to protein family HMM PF00571; match to protein family HMM PF03471; match to protein family HMM PF03741. | 0.437 |
CJA_3543 | CJA_3542 | CJA_3543 | CJA_3542 | Hypothetical protein; Identified by Glimmer3; putative. | Hypothetical protein; Identified by Glimmer3; putative. | 0.558 |
CJA_3543 | exoD | CJA_3543 | CJA_3540 | Hypothetical protein; Identified by Glimmer3; putative. | ExoD; Identified by match to protein family HMM PF06055. | 0.411 |
exoD | CJA_3539 | CJA_3540 | CJA_3539 | ExoD; Identified by match to protein family HMM PF06055. | Conserved hypothetical protein; Identified by match to protein family HMM PF04339. | 0.518 |
exoD | CJA_3541 | CJA_3540 | CJA_3541 | ExoD; Identified by match to protein family HMM PF06055. | CBS domain protein; Identified by match to protein family HMM PF00571; match to protein family HMM PF03471; match to protein family HMM PF03741. | 0.728 |
exoD | CJA_3542 | CJA_3540 | CJA_3542 | ExoD; Identified by match to protein family HMM PF06055. | Hypothetical protein; Identified by Glimmer3; putative. | 0.552 |
exoD | CJA_3543 | CJA_3540 | CJA_3543 | ExoD; Identified by match to protein family HMM PF06055. | Hypothetical protein; Identified by Glimmer3; putative. | 0.411 |
guaA | CJA_3541 | CJA_2103 | CJA_3541 | GMP synthase, C- domain protein; Catalyzes the synthesis of GMP from XMP. | CBS domain protein; Identified by match to protein family HMM PF00571; match to protein family HMM PF03471; match to protein family HMM PF03741. | 0.492 |