STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VDAG_02567Transforming protein p29. (221 aa)    
Predicted Functional Partners:
VDAG_00448
Rho-type GTPase-activating protein.
    
 0.952
VDAG_04078
Ras GTPase activator.
    
 0.847
VDAG_06629
Cell division control protein.
    
 0.820
VDAG_00094
Ras GTPase-activating protein.
    
 0.782
VDAG_01854
Uncharacterized protein.
   
 0.778
VDAG_04058
WW domain-containing protein.
   
 0.778
VDAG_04278
Rho-type GTPase-activating protein.
    
 0.747
VDAG_03774
Rho guanine nucleotide exchange factor scd1.
    
 0.704
VDAG_00673
Protein kinase domain-containing protein.
   
 0.703
VDAG_01735
Uncharacterized protein.
    
 0.700
Your Current Organism:
Verticillium dahliae
NCBI taxonomy Id: 498257
Other names: V. dahliae VdLs.17, Verticillium dahliae VdLs.17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.