Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFM4 | VDAG_00461 | G2X7C4 | G2WQ19 | Protein-lysine N-methyltransferase EFM4; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that mono- and dimethylates elongation factor 1-alpha at 'Lys-316'. May play a role in intracellular transport. Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family. | Elongation factor 2. | 0.493 |
EFM4 | VDAG_00997 | G2X7C4 | G2WT74 | Protein-lysine N-methyltransferase EFM4; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that mono- and dimethylates elongation factor 1-alpha at 'Lys-316'. May play a role in intracellular transport. Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family. | Uncharacterized protein. | 0.668 |
EFM4 | VDAG_02603 | G2X7C4 | G2WYC1 | Protein-lysine N-methyltransferase EFM4; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that mono- and dimethylates elongation factor 1-alpha at 'Lys-316'. May play a role in intracellular transport. Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family. | FAM86A protein. | 0.611 |
EFM4 | VDAG_04443 | G2X7C4 | G2X2B9 | Protein-lysine N-methyltransferase EFM4; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that mono- and dimethylates elongation factor 1-alpha at 'Lys-316'. May play a role in intracellular transport. Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family. | Mni1p. | 0.506 |
MEF1 | VDAG_02603 | G2WTJ4 | G2WYC1 | Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. | FAM86A protein. | 0.541 |
VDAG_00461 | EFM4 | G2WQ19 | G2X7C4 | Elongation factor 2. | Protein-lysine N-methyltransferase EFM4; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that mono- and dimethylates elongation factor 1-alpha at 'Lys-316'. May play a role in intracellular transport. Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family. | 0.493 |
VDAG_00461 | VDAG_02603 | G2WQ19 | G2WYC1 | Elongation factor 2. | FAM86A protein. | 0.976 |
VDAG_00886 | VDAG_02603 | G2WSW3 | G2WYC1 | GTP-binding protein ypt3. | FAM86A protein. | 0.591 |
VDAG_00969 | VDAG_02603 | G2WT46 | G2WYC1 | U5 small nuclear ribonucleoprotein component. | FAM86A protein. | 0.541 |
VDAG_00969 | VDAG_08364 | G2WT46 | G2XDY2 | U5 small nuclear ribonucleoprotein component. | Zinc finger protein RTS2. | 0.555 |
VDAG_00997 | EFM4 | G2WT74 | G2X7C4 | Uncharacterized protein. | Protein-lysine N-methyltransferase EFM4; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that mono- and dimethylates elongation factor 1-alpha at 'Lys-316'. May play a role in intracellular transport. Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family. | 0.668 |
VDAG_00997 | VDAG_02603 | G2WT74 | G2WYC1 | Uncharacterized protein. | FAM86A protein. | 0.606 |
VDAG_00997 | VDAG_04443 | G2WT74 | G2X2B9 | Uncharacterized protein. | Mni1p. | 0.496 |
VDAG_02603 | EFM4 | G2WYC1 | G2X7C4 | FAM86A protein. | Protein-lysine N-methyltransferase EFM4; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that mono- and dimethylates elongation factor 1-alpha at 'Lys-316'. May play a role in intracellular transport. Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family. | 0.611 |
VDAG_02603 | MEF1 | G2WYC1 | G2WTJ4 | FAM86A protein. | Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. | 0.541 |
VDAG_02603 | VDAG_00461 | G2WYC1 | G2WQ19 | FAM86A protein. | Elongation factor 2. | 0.976 |
VDAG_02603 | VDAG_00886 | G2WYC1 | G2WSW3 | FAM86A protein. | GTP-binding protein ypt3. | 0.591 |
VDAG_02603 | VDAG_00969 | G2WYC1 | G2WT46 | FAM86A protein. | U5 small nuclear ribonucleoprotein component. | 0.541 |
VDAG_02603 | VDAG_00997 | G2WYC1 | G2WT74 | FAM86A protein. | Uncharacterized protein. | 0.606 |
VDAG_02603 | VDAG_04443 | G2WYC1 | G2X2B9 | FAM86A protein. | Mni1p. | 0.534 |
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