STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VDAG_03491Uncharacterized protein. (204 aa)    
Predicted Functional Partners:
VDAG_02441
60S ribosomal protein L21-B.
   
   0.526
VDAG_08839
50S ribosomal protein L2.
   
 
 0.486
VDAG_07204
60S ribosomal protein L16; Belongs to the universal ribosomal protein uL13 family.
   
   0.478
VDAG_05940
60S ribosomal protein L2.
   
 
 0.477
VDAG_05789
60S ribosomal protein L39.
   
   0.455
VDAG_05693
54S ribosomal protein L23.
   
   0.437
Your Current Organism:
Verticillium dahliae
NCBI taxonomy Id: 498257
Other names: V. dahliae VdLs.17, Verticillium dahliae VdLs.17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.