STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VDAG_04525Uncharacterized protein. (295 aa)    
Predicted Functional Partners:
VDAG_06113
Set1 complex component swd1.
   
 0.878
VDAG_01927
Set1 complex component ash2.
    
 0.877
VDAG_01423
Histone-lysine N-methyltransferase.
    
 0.827
VDAG_00139
Uncharacterized protein.
    
 0.686
VDAG_04456
Nuclear pore glycoprotein p62.
    
 0.686
VDAG_06605
Histone H3.
    
 0.676
VDAG_10035
Histone H3; Belongs to the histone H3 family.
    
 0.676
VDAG_07052
Glucose repression mediator protein CYC8.
    
 0.671
VDAG_03061
Uncharacterized protein.
    
 0.650
VDAG_09414
Histone H2A; Belongs to the histone H2A family.
   
  0.647
Your Current Organism:
Verticillium dahliae
NCBI taxonomy Id: 498257
Other names: V. dahliae VdLs.17, Verticillium dahliae VdLs.17
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.