Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VDAG_00824 | VDAG_01565 | G2WSP3 | G2WSG2 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Sarcosine oxidase. | 0.930 |
VDAG_00824 | VDAG_01611 | G2WSP3 | G2WSL5 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Uncharacterized protein. | 0.930 |
VDAG_00824 | VDAG_02727 | G2WSP3 | G2WWU8 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. | 0.991 |
VDAG_00824 | VDAG_02929 | G2WSP3 | G2WXF0 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Homocysteine S-methyltransferase. | 0.787 |
VDAG_00824 | VDAG_03276 | G2WSP3 | G2WZ34 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Methylenetetrahydrofolate dehydrogenase. | 0.991 |
VDAG_00824 | VDAG_05053 | G2WSP3 | G2X4H1 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Sarcosine dehydrogenase. | 0.634 |
VDAG_00824 | VDAG_06689 | G2WSP3 | G2X957 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Serine hydroxymethyltransferase. | 0.906 |
VDAG_00824 | VDAG_08214 | G2WSP3 | G2XDI2 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Sarcosine oxidase. | 0.930 |
VDAG_01565 | VDAG_00824 | G2WSG2 | G2WSP3 | Sarcosine oxidase. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.930 |
VDAG_01565 | VDAG_01611 | G2WSG2 | G2WSL5 | Sarcosine oxidase. | Uncharacterized protein. | 0.907 |
VDAG_01565 | VDAG_02727 | G2WSG2 | G2WWU8 | Sarcosine oxidase. | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. | 0.934 |
VDAG_01565 | VDAG_05053 | G2WSG2 | G2X4H1 | Sarcosine oxidase. | Sarcosine dehydrogenase. | 0.940 |
VDAG_01565 | VDAG_06689 | G2WSG2 | G2X957 | Sarcosine oxidase. | Serine hydroxymethyltransferase. | 0.930 |
VDAG_01565 | VDAG_08214 | G2WSG2 | G2XDI2 | Sarcosine oxidase. | Sarcosine oxidase. | 0.907 |
VDAG_01611 | VDAG_00824 | G2WSL5 | G2WSP3 | Uncharacterized protein. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.930 |
VDAG_01611 | VDAG_01565 | G2WSL5 | G2WSG2 | Uncharacterized protein. | Sarcosine oxidase. | 0.907 |
VDAG_01611 | VDAG_02727 | G2WSL5 | G2WWU8 | Uncharacterized protein. | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. | 0.934 |
VDAG_01611 | VDAG_05053 | G2WSL5 | G2X4H1 | Uncharacterized protein. | Sarcosine dehydrogenase. | 0.940 |
VDAG_01611 | VDAG_06689 | G2WSL5 | G2X957 | Uncharacterized protein. | Serine hydroxymethyltransferase. | 0.930 |
VDAG_01611 | VDAG_08214 | G2WSL5 | G2XDI2 | Uncharacterized protein. | Sarcosine oxidase. | 0.907 |
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