STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VDAG_05571Uncharacterized protein. (284 aa)    
Predicted Functional Partners:
VDAG_01776
SMC_N domain-containing protein.
    
 0.999
VDAG_01925
zf-RING-like domain-containing protein.
    
 0.999
VDAG_02557
MAGE domain-containing protein.
    
 0.999
VDAG_09439
SMC_N domain-containing protein.
    
 0.999
VDAG_01876
Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.
    
 0.975
VDAG_01877
Uncharacterized protein.
    
 0.955
VDAG_00270
SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.945
VDAG_03475
Uncharacterized protein.
    
 0.904
VDAG_07201
Chalcone_isomerase domain-containing protein.
    
 0.904
VDAG_02409
SMT3 protein.
   
 0.887
Your Current Organism:
Verticillium dahliae
NCBI taxonomy Id: 498257
Other names: V. dahliae VdLs.17, Verticillium dahliae VdLs.17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.