STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VDAG_06379Myotubularin. (777 aa)    
Predicted Functional Partners:
VDAG_06882
SAC domain-containing protein.
     
 0.958
VDAG_10419
Polyphosphoinositide phosphatase.
   
 
 0.949
VDAG_01875
Phosphatidylinositol 3-kinase VPS34.
    
 0.944
VDAG_01095
1-phosphatidylinositol-3-phosphate 5-kinase FAB1.
     
 0.934
VDAG_08800
Phosphatidylinositol 4-kinase STT4; Belongs to the PI3/PI4-kinase family.
     
 0.908
VDAG_08987
Phosphatidylinositol 4-kinase LSB6.
     
 0.907
VDAG_05877
Phosphatidylinositol 4-kinase PIK1; Belongs to the PI3/PI4-kinase family.
     
 0.903
VDAG_07014
CDP-diacylglycerol-inositol 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.903
VDAG_01893
Phosphoinositide phospholipase C.
     
 0.901
VDAG_09501
Phosphoinositide phospholipase C.
     
 0.901
Your Current Organism:
Verticillium dahliae
NCBI taxonomy Id: 498257
Other names: V. dahliae VdLs.17, Verticillium dahliae VdLs.17
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