STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VDAG_06418Uncharacterized protein. (325 aa)    
Predicted Functional Partners:
VDAG_08702
Double-strand-break repair protein rad21.
   
 0.973
VDAG_06558
Structural maintenance of chromosomes protein.
   
 0.972
VDAG_08327
SCD domain-containing protein.
   
 0.972
VDAG_10336
Sister chromatid cohesion protein Eso1.
  
 0.970
VDAG_00695
Sister chromatid cohesion protein.
   
 0.959
VDAG_05821
Spo76 protein.
   
 0.955
VDAG_03138
Serine/threonine-protein kinase plo1.
   
 0.935
VDAG_02664
Rec8.
   
 0.914
VDAG_06322
Condensin subunit Cnd3.
   
 0.862
VDAG_09545
Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.
   
 0.859
Your Current Organism:
Verticillium dahliae
NCBI taxonomy Id: 498257
Other names: V. dahliae VdLs.17, Verticillium dahliae VdLs.17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.