STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VDAG_06479Uncharacterized protein. (814 aa)    
Predicted Functional Partners:
VDAG_00290
WD repeat-containing protein pop3.
    
 0.999
VDAG_05691
Ste16.
    
 0.999
VDAG_09065
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.999
VDAG_00844
HRDC domain-containing protein.
    
 0.957
VDAG_08821
Ethanolamine kinase.
    
 
 0.896
VDAG_02188
ANK_REP_REGION domain-containing protein.
    
 
 0.888
VDAG_01800
WD repeat-containing protein mip1.
    
 0.753
VDAG_03957
Uncharacterized protein.
    
 0.723
VDAG_00776
Non-specific serine/threonine protein kinase.
    
 0.658
VDAG_04427
Non-specific serine/threonine protein kinase.
    
 0.658
Your Current Organism:
Verticillium dahliae
NCBI taxonomy Id: 498257
Other names: V. dahliae VdLs.17, Verticillium dahliae VdLs.17
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.