Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VDAG_01177 | VDAG_07187 | G2WTQ4 | G2XB49 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl-carrier-protein] reductase. | 3-oxoacyl-[acyl-carrier-protein] reductase. | 0.400 |
VDAG_02893 | VDAG_07187 | G2WXB4 | G2XB49 | 3-beta-hydroxysteroid dehydrogenase. | 3-oxoacyl-[acyl-carrier-protein] reductase. | 0.436 |
VDAG_07187 | VDAG_01177 | G2XB49 | G2WTQ4 | 3-oxoacyl-[acyl-carrier-protein] reductase. | Rhamnolipids biosynthesis 3-oxoacyl-[acyl-carrier-protein] reductase. | 0.400 |
VDAG_07187 | VDAG_02893 | G2XB49 | G2WXB4 | 3-oxoacyl-[acyl-carrier-protein] reductase. | 3-beta-hydroxysteroid dehydrogenase. | 0.436 |
VDAG_07187 | VDAG_07343 | G2XB49 | G2XAW4 | 3-oxoacyl-[acyl-carrier-protein] reductase. | Sorbitol utilization protein SOU2. | 0.434 |
VDAG_07343 | VDAG_07187 | G2XAW4 | G2XB49 | Sorbitol utilization protein SOU2. | 3-oxoacyl-[acyl-carrier-protein] reductase. | 0.434 |