STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VDAG_08660Uncharacterized protein. (174 aa)    
Predicted Functional Partners:
VDAG_00822
Transcriptional activator SPT7.
   
 0.996
VDAG_00839
Transcription initiation factor TFIID subunit 12.
    
 0.996
VDAG_06626
SCA7 domain-containing protein.
    
 0.996
VDAG_09315
Transcription initiation factor TFIID subunit 6.
    
 0.996
VDAG_06875
Transcription initiation factor TFIID subunit 9.
    
 0.995
VDAG_04649
Transcription initiation factor TFIID subunit 5.
   
 0.994
VDAG_07095
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
 0.994
VDAG_07723
Uncharacterized protein.
    
 0.979
VDAG_00926
Transcriptional adapter 3.
  
 
 0.978
VDAG_01346
Transcription-associated protein; Belongs to the PI3/PI4-kinase family.
   
 0.978
Your Current Organism:
Verticillium dahliae
NCBI taxonomy Id: 498257
Other names: V. dahliae VdLs.17, Verticillium dahliae VdLs.17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.