STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VDAG_0954760S ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family. (149 aa)    
Predicted Functional Partners:
VDAG_00058
40S ribosomal protein S19.
   
 
 0.999
VDAG_00178
60S ribosomal protein L22.
   
 0.999
VDAG_00234
60S acidic ribosomal protein P1; Belongs to the eukaryotic ribosomal protein P1/P2 family.
 
 
 0.999
VDAG_00978
60S ribosomal protein L31.
   
 0.999
VDAG_01079
60S ribosomal protein L20.
   
 0.999
VDAG_01223
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
  
 
 0.999
VDAG_01457
Uncharacterized protein.
  
 
 0.999
VDAG_01508
60S ribosomal protein L5.
  
 0.999
VDAG_01733
40S ribosomal protein S27.
   
 
 0.999
VDAG_01978
60S ribosomal protein L26-1.
  
 0.999
Your Current Organism:
Verticillium dahliae
NCBI taxonomy Id: 498257
Other names: V. dahliae VdLs.17, Verticillium dahliae VdLs.17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.