STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA70120.1Glycosyltransferase involved in cell wall bisynthesis. (323 aa)    
Predicted Functional Partners:
SFA70104.1
Hypothetical protein.
     
 0.800
SFB21061.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.725
SFA70133.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    
0.693
SFA70048.1
Protein of unknown function.
 
 
  0.667
SFA70089.1
Lipopolysaccharide kinase (Kdo/WaaP) family protein.
       0.540
SFA70034.1
Glycosyltransferase involved in cell wall bisynthesis.
       0.536
SFA70063.1
Dolichol-phosphate mannosyltransferase.
       0.536
SFA70075.1
Protein of unknown function.
       0.536
SFB19082.1
Glycosyltransferase, GT2 family.
  
  
  0.515
SFA70157.1
Methyltransferase, FkbM family.
  
 
  0.490
Your Current Organism:
Flavobacterium swingsii
NCBI taxonomy Id: 498292
Other names: CIP 109868, DSM 21789, F. swingsii, Flavobacterium sp. WB2.3-68, Flavobacterium swingsii Ali et al. 2009, WB 2.3-68, strain WB2.3-68
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.