STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA70330.12TM domain-containing protein. (104 aa)    
Predicted Functional Partners:
SFA70312.1
2TM domain-containing protein.
 
    
0.808
SFA70343.1
Putative regulator of cell autolysis.
 
    
0.793
SFA70283.1
Two component transcriptional regulator, LytTR family.
  
  0.750
SFA70356.1
Hypothetical protein.
       0.692
SFA88908.1
Two component transcriptional regulator, LytTR family.
   
  0.458
SFB12481.1
Two component transcriptional regulator, LytTR family.
   
  0.458
SFA70369.1
Outer membrane cobalamin receptor protein.
       0.445
SFA85533.1
Hypothetical protein.
  
     0.419
SFB26814.1
Hypothetical protein.
  
     0.413
SFB22533.1
Hypothetical protein.
  
     0.406
Your Current Organism:
Flavobacterium swingsii
NCBI taxonomy Id: 498292
Other names: CIP 109868, DSM 21789, F. swingsii, Flavobacterium sp. WB2.3-68, Flavobacterium swingsii Ali et al. 2009, WB 2.3-68, strain WB2.3-68
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.