STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA72814.1Peptidase family M23. (369 aa)    
Predicted Functional Partners:
SFA72771.1
Transcriptional regulator, PadR family.
       0.774
SFA72791.1
Phage shock protein C (PspC) family protein.
       0.773
SFA76034.1
Peptidase family M23.
  
     0.755
SFB02233.1
Peptidase family M23.
  
     0.719
SFA72832.1
Putative auto-transporter adhesin, head GIN domain.
       0.686
SFA72753.1
Hypothetical protein.
       0.559
SFB22553.1
Peptidase family M23.
  
     0.535
SFB23758.1
Cyanophycin synthetase; Belongs to the MurCDEF family.
    
 0.524
SFA72851.1
Putative auto-transporter adhesin, head GIN domain.
       0.506
SFA98157.1
Penicillin-binding protein 1A.
  
     0.459
Your Current Organism:
Flavobacterium swingsii
NCBI taxonomy Id: 498292
Other names: CIP 109868, DSM 21789, F. swingsii, Flavobacterium sp. WB2.3-68, Flavobacterium swingsii Ali et al. 2009, WB 2.3-68, strain WB2.3-68
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.