STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA78074.1Two component transcriptional regulator, LuxR family. (209 aa)    
Predicted Functional Partners:
SFA92348.1
PAS domain S-box-containing protein.
 
 0.974
SFA92907.1
PAS domain S-box-containing protein; Manually curated.
  
 0.970
SFA91508.1
PAS domain S-box-containing protein.
 
 0.959
SFB09965.1
PAS domain S-box-containing protein.
  
 0.953
SFA72905.1
Signal transduction histidine kinase.
 
  0.895
SFB01142.1
Histidine kinase.
  
  0.893
SFB26653.1
TPR repeat-containing protein.
  
  0.893
SFA75847.1
Tetratricopeptide repeat-containing protein.
 
  0.884
SFA70986.1
Signal transduction histidine kinase.
   
 0.804
SFA71015.1
Signal transduction histidine kinase.
   
 0.804
Your Current Organism:
Flavobacterium swingsii
NCBI taxonomy Id: 498292
Other names: CIP 109868, DSM 21789, F. swingsii, Flavobacterium sp. WB2.3-68, Flavobacterium swingsii Ali et al. 2009, WB 2.3-68, strain WB2.3-68
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.