STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA88772.1Glycosyltransferase, GT2 family. (298 aa)    
Predicted Functional Partners:
SFA88744.1
Methyltransferase domain-containing protein.
       0.784
rlmH
23S rRNA (pseudouridine1915-N3)-methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.
       0.773
SFA88616.1
Glycosyltransferase involved in cell wall bisynthesis.
  
 
  0.708
SFB02534.1
Hypothetical protein.
  
     0.659
SFA68868.1
Hypothetical protein.
  
     0.652
SFB18842.1
Por secretion system C-terminal sorting domain-containing protein.
  
    0.636
SFB19638.1
Hypothetical protein.
  
     0.603
SFB03018.1
Hypothetical protein.
  
     0.587
SFB22581.1
TonB-dependent Receptor Plug Domain.
  
     0.576
SFA71853.1
Glycosyltransferase, GT2 family.
  
  
  0.568
Your Current Organism:
Flavobacterium swingsii
NCBI taxonomy Id: 498292
Other names: CIP 109868, DSM 21789, F. swingsii, Flavobacterium sp. WB2.3-68, Flavobacterium swingsii Ali et al. 2009, WB 2.3-68, strain WB2.3-68
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.