STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA98005.1Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. (404 aa)    
Predicted Functional Partners:
SFB09755.1
Cell division transport system permease protein; Required for cell division and gliding motility. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
 
 
 0.899
SFA97992.1
Protein of unknown function.
       0.772
SFA97973.1
Tetratricopeptide repeat-containing protein.
       0.748
SFA69540.1
Tetratricopeptide repeat-containing protein.
 
 
   0.731
SFA68911.1
Peptidase family M48.
   
   0.610
SFB10032.1
Peptidase family M48.
   
   0.610
SFB27049.1
Protein of unknown function.
   
   0.610
SFA97960.1
Glucose-1-phosphate thymidylyltransferase.
       0.599
SFA91712.1
N-acetylmuramoyl-L-alanine amidase.
 
 
 0.589
SFA77682.1
Cell division protein FtsQ.
  
     0.514
Your Current Organism:
Flavobacterium swingsii
NCBI taxonomy Id: 498292
Other names: CIP 109868, DSM 21789, F. swingsii, Flavobacterium sp. WB2.3-68, Flavobacterium swingsii Ali et al. 2009, WB 2.3-68, strain WB2.3-68
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