STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA98566.1HAMP domain-containing protein. (480 aa)    
Predicted Functional Partners:
SFA72590.1
DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains.
 
 0.960
SFA91508.1
PAS domain S-box-containing protein.
 
 
 0.954
SFA92348.1
PAS domain S-box-containing protein.
 
 
0.931
SFA92907.1
PAS domain S-box-containing protein; Manually curated.
 
 
0.930
SFB09965.1
PAS domain S-box-containing protein.
   
 0.920
SFB13237.1
Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP.
 
 
 0.898
SFB15417.1
Signal transduction histidine kinase.
 
0.870
SFA70986.1
Signal transduction histidine kinase.
 
 
0.859
SFA71015.1
Signal transduction histidine kinase.
 
 
0.859
SFB29332.1
Response regulator receiver domain-containing protein.
 
 
 0.854
Your Current Organism:
Flavobacterium swingsii
NCBI taxonomy Id: 498292
Other names: CIP 109868, DSM 21789, F. swingsii, Flavobacterium sp. WB2.3-68, Flavobacterium swingsii Ali et al. 2009, WB 2.3-68, strain WB2.3-68
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.