STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB00873.1Hypothetical protein. (118 aa)    
Predicted Functional Partners:
SFB10218.1
Protein of unknown function.
  
     0.762
SFA77991.1
Protein involved in gliding motility GldC.
  
     0.747
SFA90942.1
Acyl-CoA reductase (LuxC).
  
     0.695
SFA91809.1
Hypothetical protein.
  
     0.675
SFA87623.1
Protein of unknown function.
  
     0.654
SFA72159.1
Hypothetical protein.
  
     0.628
SFA86425.1
ATP-dependent Clp protease adaptor protein ClpS; Belongs to the ClpS family.
  
     0.616
SFB00886.1
Membrane protein required for colicin V production.
       0.616
SFB12072.1
uroporphyrinogen-III synthase.
  
     0.602
SFB10284.1
Uncharacterized metal-binding protein YceD, DUF177 family.
  
     0.598
Your Current Organism:
Flavobacterium swingsii
NCBI taxonomy Id: 498292
Other names: CIP 109868, DSM 21789, F. swingsii, Flavobacterium sp. WB2.3-68, Flavobacterium swingsii Ali et al. 2009, WB 2.3-68, strain WB2.3-68
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