STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB04539.1TonB protein C-terminal. (130 aa)    
Predicted Functional Partners:
SFB04504.1
TonB protein C-terminal.
 
0.889
SFB10643.1
WD40-like Beta Propeller Repeat.
 
 
 
 0.809
SFB04431.1
Outer membrane transport energization protein ExbD.
  
  0.763
SFB04414.1
Outer membrane transport energization protein ExbD.
  
  0.761
SFA84289.1
Biopolymer transport protein ExbB.
 
  0.736
SFA84274.1
Biopolymer transport protein ExbD.
  
  0.727
SFB04396.1
Outer membrane transport energization protein ExbB.
 
  0.721
SFA69274.1
Predicted transcriptional regulator.
 
 
 0.712
SFA72435.1
TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region.
  
  0.695
SFA77303.1
Outer membrane receptor for ferrienterochelin and colicins.
  
  0.634
Your Current Organism:
Flavobacterium swingsii
NCBI taxonomy Id: 498292
Other names: CIP 109868, DSM 21789, F. swingsii, Flavobacterium sp. WB2.3-68, Flavobacterium swingsii Ali et al. 2009, WB 2.3-68, strain WB2.3-68
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.