STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB09544.1Carboxyl-terminal processing protease; Belongs to the peptidase S41A family. (545 aa)    
Predicted Functional Partners:
SFA89855.1
Tetratricopeptide repeat-containing protein.
   
 0.823
SFB03877.1
Homoserine O-acetyltransferase; Belongs to the AB hydrolase superfamily. MetX family.
    
  0.700
SFB03898.1
Aspartate kinase.
    
  0.700
SFB09527.1
Hypothetical protein.
       0.581
SFB04250.1
Por secretion system C-terminal sorting domain-containing protein.
  
  0.543
SFA93605.1
Gliding motility-associated C-terminal domain-containing protein; Partial gene; manually curated.
  
  0.537
mtgA
Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.
 
     0.508
SFA70439.1
Por secretion system C-terminal sorting domain-containing protein.
   
  0.477
SFA70491.1
Gliding motility-associated C-terminal domain-containing protein.
   
  0.477
SFA70517.1
Gliding motility-associated C-terminal domain-containing protein.
   
  0.477
Your Current Organism:
Flavobacterium swingsii
NCBI taxonomy Id: 498292
Other names: CIP 109868, DSM 21789, F. swingsii, Flavobacterium sp. WB2.3-68, Flavobacterium swingsii Ali et al. 2009, WB 2.3-68, strain WB2.3-68
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.