STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB09582.1Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (396 aa)    
Predicted Functional Partners:
SFA92348.1
PAS domain S-box-containing protein.
 
 0.966
SFA92907.1
PAS domain S-box-containing protein; Manually curated.
 
 0.966
SFA91508.1
PAS domain S-box-containing protein.
 
 
0.832
SFB09965.1
PAS domain S-box-containing protein.
   
 0.816
SFA93185.1
Response regulator receiver domain-containing protein.
  
 
 0.805
SFB26794.1
Pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component.
    
 0.780
SFB29556.1
2-oxoisovalerate dehydrogenase E1 component.
    
 0.780
mtgA
Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.
       0.773
SFB09568.1
Glycine/D-amino acid oxidase.
       0.773
SFA71015.1
Signal transduction histidine kinase.
 
 
 0.772
Your Current Organism:
Flavobacterium swingsii
NCBI taxonomy Id: 498292
Other names: CIP 109868, DSM 21789, F. swingsii, Flavobacterium sp. WB2.3-68, Flavobacterium swingsii Ali et al. 2009, WB 2.3-68, strain WB2.3-68
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.