STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB10165.1Cysteine desulfurase / selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. (416 aa)    
Predicted Functional Partners:
SFB10194.1
Cysteine desulfuration protein SufE.
 0.996
SFB10116.1
Fe-S cluster assembly ATP-binding protein.
 
 
 0.945
SFB10133.1
Fe-S cluster assembly protein SufD.
 
 0.931
SFB10082.1
Iron-regulated ABC transporter membrane component SufB.
 
 0.929
SFA70676.1
Thioredoxin reductase (NADPH).
   
 
  0.901
SFA72870.1
Thioredoxin reductase (NADPH).
   
 
  0.901
SFB26602.1
Cysteine desulfurase.
    
0.900
SFB10204.1
FeS assembly SUF system protein.
 
 
 0.861
SFB23347.1
Metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family.
    
   0.766
SFB10218.1
Protein of unknown function.
       0.750
Your Current Organism:
Flavobacterium swingsii
NCBI taxonomy Id: 498292
Other names: CIP 109868, DSM 21789, F. swingsii, Flavobacterium sp. WB2.3-68, Flavobacterium swingsii Ali et al. 2009, WB 2.3-68, strain WB2.3-68
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.