Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFA71295.1 | SFB10785.1 | SAMN05660845_0177 | SAMN05660845_1644 | Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | 0.607 |
SFA71295.1 | SFB19537.1 | SAMN05660845_0177 | SAMN05660845_1961 | Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | DNA repair protein RadC; Belongs to the UPF0758 family. | 0.794 |
SFA92348.1 | SFA92907.1 | SAMN05660845_1002 | SAMN05660845_1031 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein; Manually curated. | 0.999 |
SFA92348.1 | SFB10958.1 | SAMN05660845_1002 | SAMN05660845_1655 | PAS domain S-box-containing protein. | comF family protein. | 0.609 |
SFA92348.1 | SFB19537.1 | SAMN05660845_1002 | SAMN05660845_1961 | PAS domain S-box-containing protein. | DNA repair protein RadC; Belongs to the UPF0758 family. | 0.554 |
SFA92907.1 | SFA92348.1 | SAMN05660845_1031 | SAMN05660845_1002 | PAS domain S-box-containing protein; Manually curated. | PAS domain S-box-containing protein. | 0.999 |
SFA92907.1 | SFB10958.1 | SAMN05660845_1031 | SAMN05660845_1655 | PAS domain S-box-containing protein; Manually curated. | comF family protein. | 0.609 |
SFA92907.1 | SFB19537.1 | SAMN05660845_1031 | SAMN05660845_1961 | PAS domain S-box-containing protein; Manually curated. | DNA repair protein RadC; Belongs to the UPF0758 family. | 0.554 |
SFB10785.1 | SFA71295.1 | SAMN05660845_1644 | SAMN05660845_0177 | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | 0.607 |
SFB10785.1 | SFB19537.1 | SAMN05660845_1644 | SAMN05660845_1961 | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | DNA repair protein RadC; Belongs to the UPF0758 family. | 0.773 |
SFB10958.1 | SFA92348.1 | SAMN05660845_1655 | SAMN05660845_1002 | comF family protein. | PAS domain S-box-containing protein. | 0.609 |
SFB10958.1 | SFA92907.1 | SAMN05660845_1655 | SAMN05660845_1031 | comF family protein. | PAS domain S-box-containing protein; Manually curated. | 0.609 |
SFB10958.1 | SFB19537.1 | SAMN05660845_1655 | SAMN05660845_1961 | comF family protein. | DNA repair protein RadC; Belongs to the UPF0758 family. | 0.738 |
SFB19520.1 | SFB19537.1 | SAMN05660845_1960 | SAMN05660845_1961 | Hypothetical protein. | DNA repair protein RadC; Belongs to the UPF0758 family. | 0.559 |
SFB19520.1 | SFB19553.1 | SAMN05660845_1960 | SAMN05660845_1962 | Hypothetical protein. | Putative hydrolase of the HAD superfamily. | 0.559 |
SFB19520.1 | SFB19565.1 | SAMN05660845_1960 | SAMN05660845_1963 | Hypothetical protein. | Hypothetical protein. | 0.559 |
SFB19537.1 | SFA71295.1 | SAMN05660845_1961 | SAMN05660845_0177 | DNA repair protein RadC; Belongs to the UPF0758 family. | Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | 0.794 |
SFB19537.1 | SFA92348.1 | SAMN05660845_1961 | SAMN05660845_1002 | DNA repair protein RadC; Belongs to the UPF0758 family. | PAS domain S-box-containing protein. | 0.554 |
SFB19537.1 | SFA92907.1 | SAMN05660845_1961 | SAMN05660845_1031 | DNA repair protein RadC; Belongs to the UPF0758 family. | PAS domain S-box-containing protein; Manually curated. | 0.554 |
SFB19537.1 | SFB10785.1 | SAMN05660845_1961 | SAMN05660845_1644 | DNA repair protein RadC; Belongs to the UPF0758 family. | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | 0.773 |
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