STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB20928.1NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC. (655 aa)    
Predicted Functional Partners:
SFB20678.1
UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase.
 
 
 0.961
SFB20960.1
Capsular exopolysaccharide family.
 
 
 0.956
SFB20909.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.915
SFB20522.1
Capsular exopolysaccharide family.
  
 
 0.906
SFB20944.1
Polysaccharide export outer membrane protein.
  
 
 0.869
SFA70177.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.818
SFA88553.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.818
SFB14098.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.818
SFB20865.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
 
 
 0.784
SFB20495.1
Polysaccharide export outer membrane protein.
  
 
 0.727
Your Current Organism:
Flavobacterium swingsii
NCBI taxonomy Id: 498292
Other names: CIP 109868, DSM 21789, F. swingsii, Flavobacterium sp. WB2.3-68, Flavobacterium swingsii Ali et al. 2009, WB 2.3-68, strain WB2.3-68
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.