STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB21148.1Glycosyltransferase, GT2 family. (262 aa)    
Predicted Functional Partners:
SFB21245.1
CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase.
 
  
 0.869
SFB21162.1
UDP-N-acetylglucosamine 2-epimerase (hydrolysing).
    
  0.822
SFB21296.1
Glycosyltransferase involved in cell wall bisynthesis.
 
  
  0.820
SFB21136.1
N-acetylneuraminate synthase.
       0.782
SFB21175.1
Hypothetical protein.
       0.757
SFB21267.1
Glycosyltransferase involved in cell wall bisynthesis.
    
  0.756
SFB21335.1
O-antigen ligase.
 
   
 0.741
SFB21311.1
Glycosyltransferase involved in cell wall bisynthesis.
 
  
  0.739
SFB21189.1
Dolichol-phosphate mannosyltransferase.
    
  0.728
SFA89855.1
Tetratricopeptide repeat-containing protein.
  
 0.710
Your Current Organism:
Flavobacterium swingsii
NCBI taxonomy Id: 498292
Other names: CIP 109868, DSM 21789, F. swingsii, Flavobacterium sp. WB2.3-68, Flavobacterium swingsii Ali et al. 2009, WB 2.3-68, strain WB2.3-68
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.