STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB23135.1Dienelactone hydrolase. (252 aa)    
Predicted Functional Partners:
SFA69000.1
3-hydroxyacyl-CoA dehydrogenase.
   
 
 0.685
SFB23160.1
Negative transcriptional regulator, PaiB family.
       0.593
SFB23149.1
Iron complex transport system ATP-binding protein.
       0.578
murB
UDP-N-acetylmuramate dehydrogenase; Cell wall formation.
       0.578
SFB19229.1
Glycine dehydrogenase; Belongs to the GcvP family.
  
    0.555
SFA91824.1
Beta-glucosidase.
    
  0.524
SFA93119.1
Por secretion system C-terminal sorting domain-containing protein.
  
 
 0.498
SFA87914.1
3-hydroxybutyryl-CoA dehydrogenase.
   
 
  0.495
SFB23199.1
Protein involved in gliding motility RemC.
  
    0.495
SFB23192.1
Asparagine synthase (glutamine-hydrolysing).
  
    0.493
Your Current Organism:
Flavobacterium swingsii
NCBI taxonomy Id: 498292
Other names: CIP 109868, DSM 21789, F. swingsii, Flavobacterium sp. WB2.3-68, Flavobacterium swingsii Ali et al. 2009, WB 2.3-68, strain WB2.3-68
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