STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB23441.1Chromosome partitioning protein, ParB family; Belongs to the ParB family. (299 aa)    
Predicted Functional Partners:
SFB23464.1
Chromosome partitioning protein.
 
 
 0.992
SFB23390.1
Dihydrodipicolinate reductase; Belongs to the DapB family.
     
 0.839
SFA75271.1
Starch-binding associating with outer membrane.
  
 
 0.834
SFB23422.1
Hypothetical protein.
       0.824
SFA92247.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
  
   
 0.803
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
    
 0.795
SFB23401.1
Hypothetical protein.
       0.773
rsmG
16S rRNA m(7)G-527 methyltransferase; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
  
  
 0.727
SFB23373.1
Signal peptidase I; Belongs to the peptidase S26 family.
    
 0.698
SFB23362.1
WbqC-like protein family protein.
       0.680
Your Current Organism:
Flavobacterium swingsii
NCBI taxonomy Id: 498292
Other names: CIP 109868, DSM 21789, F. swingsii, Flavobacterium sp. WB2.3-68, Flavobacterium swingsii Ali et al. 2009, WB 2.3-68, strain WB2.3-68
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.