STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001493375_00268Unannotated protein. (294 aa)    
Predicted Functional Partners:
GCA_001493375_02280
Unannotated protein.
    
 0.931
GCA_001493375_00269
Unannotated protein.
  
  
 0.913
GCA_001493375_00270
Unannotated protein.
 
    0.875
GCA_001493375_00267
Unannotated protein.
     
 0.814
GCA_001493375_03332
Unannotated protein.
  
  
 
0.808
GCA_001493375_05030
Unannotated protein.
  
  
 
0.800
GCA_001493375_00266
Unannotated protein.
 
    0.759
GCA_001493375_01059
Unannotated protein.
  
  
 
0.736
GCA_001493375_01068
Unannotated protein.
  
  
 
0.736
GCA_001493375_00015
Unannotated protein.
   
 0.724
Your Current Organism:
Streptomyces specialis
NCBI taxonomy Id: 498367
Other names: CCM 7499, DSM 41924, JCM 16611, S. specialis, Streptomyces specialis Kampfer et al. 2008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.