STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001493375_00438Unannotated protein. (354 aa)    
Predicted Functional Partners:
GCA_001493375_00436
Unannotated protein.
 
 
 0.999
GCA_001493375_00437
Unannotated protein.
  
 0.999
GCA_001493375_00439
Unannotated protein.
 
 0.995
GCA_001493375_04908
Unannotated protein.
  
 
 0.967
GCA_001493375_02507
Unannotated protein.
    
 0.626
GCA_001493375_03181
Unannotated protein.
 
  
 0.603
GCA_001493375_02361
Unannotated protein.
 
 
 
 0.597
GCA_001493375_02229
Unannotated protein.
 
 
 
 0.596
GCA_001493375_02619
Unannotated protein.
 
  
 0.596
GCA_001493375_02657
Unannotated protein.
 
  
 0.552
Your Current Organism:
Streptomyces specialis
NCBI taxonomy Id: 498367
Other names: CCM 7499, DSM 41924, JCM 16611, S. specialis, Streptomyces specialis Kampfer et al. 2008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.