STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001493375_00765Unannotated protein. (409 aa)    
Predicted Functional Partners:
GCA_001493375_04025
Unannotated protein.
       0.576
GCA_001493375_04026
Unannotated protein.
       0.576
GCA_001493375_04637
Unannotated protein.
       0.570
GCA_001493375_00764
Unannotated protein.
       0.483
GCA_001493375_04628
Unannotated protein.
    
  0.464
GCA_001493375_03808
Unannotated protein.
    
 0.447
GCA_001493375_04262
Unannotated protein.
   
 0.434
GCA_001493375_02289
Unannotated protein.
   
 
  0.430
GCA_001493375_02648
Unannotated protein.
    
  0.417
Your Current Organism:
Streptomyces specialis
NCBI taxonomy Id: 498367
Other names: CCM 7499, DSM 41924, JCM 16611, S. specialis, Streptomyces specialis Kampfer et al. 2008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.