STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001493375_01065Unannotated protein. (92 aa)    
Predicted Functional Partners:
GCA_001493375_01066
Unannotated protein.
 
     0.916
GCA_001493375_01061
Unannotated protein.
 
     0.792
GCA_001493375_02506
Unannotated protein.
 
     0.763
GCA_001493375_04973
Unannotated protein.
  
     0.722
GCA_001493375_01268
Unannotated protein.
  
     0.690
GCA_001493375_00650
Unannotated protein.
  
     0.619
GCA_001493375_02190
Unannotated protein.
  
     0.500
GCA_001493375_01307
Unannotated protein.
  
     0.451
GCA_001493375_03555
Unannotated protein.
  
     0.440
GCA_001493375_00270
Unannotated protein.
  
     0.437
Your Current Organism:
Streptomyces specialis
NCBI taxonomy Id: 498367
Other names: CCM 7499, DSM 41924, JCM 16611, S. specialis, Streptomyces specialis Kampfer et al. 2008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.