STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001493375_01918Unannotated protein. (553 aa)    
Predicted Functional Partners:
GCA_001493375_01919
Unannotated protein.
 
     0.895
GCA_001493375_01917
Unannotated protein.
       0.876
GCA_001493375_02712
Unannotated protein.
    
  0.682
GCA_001493375_04854
Unannotated protein.
    
  0.682
GCA_001493375_01542
Unannotated protein.
     
 0.663
GCA_001493375_00465
Unannotated protein.
       0.576
GCA_001493375_02413
Unannotated protein.
       0.576
GCA_001493375_05501
Unannotated protein.
       0.576
GCA_001493375_03993
Unannotated protein.
  
  
  0.541
GCA_001493375_01920
Unannotated protein.
       0.516
Your Current Organism:
Streptomyces specialis
NCBI taxonomy Id: 498367
Other names: CCM 7499, DSM 41924, JCM 16611, S. specialis, Streptomyces specialis Kampfer et al. 2008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.