STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001493375_02537Unannotated protein. (217 aa)    
Predicted Functional Partners:
GCA_001493375_02538
Unannotated protein.
 
 
0.994
GCA_001493375_02539
Unannotated protein.
 
 0.985
GCA_001493375_03846
Unannotated protein.
 
  
 
0.962
GCA_001493375_02540
Unannotated protein.
 
 
 0.960
GCA_001493375_02541
Unannotated protein.
 
 
 0.957
GCA_001493375_05001
Unannotated protein.
 
 
0.955
GCA_001493375_04996
Unannotated protein.
 
 
0.952
GCA_001493375_05006
Unannotated protein.
 
 
0.952
GCA_001493375_04341
Unannotated protein.
 
 
0.951
GCA_001493375_05003
Unannotated protein.
 
 0.721
Your Current Organism:
Streptomyces specialis
NCBI taxonomy Id: 498367
Other names: CCM 7499, DSM 41924, JCM 16611, S. specialis, Streptomyces specialis Kampfer et al. 2008
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.