STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001493375_03993Unannotated protein. (300 aa)    
Predicted Functional Partners:
GCA_001493375_00589
Unannotated protein.
  
 0.912
GCA_001493375_05126
Unannotated protein.
  
 0.912
GCA_001493375_00275
Unannotated protein.
   
    0.837
GCA_001493375_05073
Unannotated protein.
   
    0.837
GCA_001493375_01405
Unannotated protein.
    
 0.805
GCA_001493375_04692
Unannotated protein.
    
  0.804
GCA_001493375_03909
Unannotated protein.
   
 
 0.801
GCA_001493375_00516
Unannotated protein.
  
 
 0.786
GCA_001493375_01809
Unannotated protein.
  
 
 0.786
GCA_001493375_01817
Unannotated protein.
  
 
 0.786
Your Current Organism:
Streptomyces specialis
NCBI taxonomy Id: 498367
Other names: CCM 7499, DSM 41924, JCM 16611, S. specialis, Streptomyces specialis Kampfer et al. 2008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.