STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001493375_05165Unannotated protein. (116 aa)    
Predicted Functional Partners:
GCA_001493375_01405
Unannotated protein.
   
  0.767
GCA_001493375_02748
Unannotated protein.
    
  0.752
GCA_001493375_01028
Unannotated protein.
  
     0.742
GCA_001493375_03496
Unannotated protein.
    
  0.706
GCA_001493375_03569
Unannotated protein.
    
  0.706
GCA_001493375_03343
Unannotated protein.
  
     0.668
GCA_001493375_05423
Unannotated protein.
  
     0.658
GCA_001493375_04735
Unannotated protein.
    
 
 0.564
GCA_001493375_00656
Unannotated protein.
  
 
 0.563
GCA_001493375_04096
Unannotated protein.
   
 0.558
Your Current Organism:
Streptomyces specialis
NCBI taxonomy Id: 498367
Other names: CCM 7499, DSM 41924, JCM 16611, S. specialis, Streptomyces specialis Kampfer et al. 2008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.