STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF84481.1Putrescine transport system permease protein PotH; Identified by match to protein family HMM PF00528. (267 aa)    
Predicted Functional Partners:
EEF84465.1
Spermidine/putrescine ABC transporter, spermidine/putrescine-binding periplasmic protein; Identified by match to protein family HMM PF01547.
 
 
 0.999
EEF84525.1
Binding-protein-dependent transport systems inner membrane component domain protein; Identified by match to protein family HMM PF00528.
 
 0.999
potA
Spermidine/putrescine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
 0.999
EEF84358.1
Putative competence locus E; Identified by match to protein family HMM PF03772; match to protein family HMM TIGR00360.
       0.742
EEF84909.1
Exonuclease SbcC; Identified by match to protein family HMM PF02463.
    
  0.685
EEF84181.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
    
  0.620
EEF84453.1
GTP-binding protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.
  
    0.614
metK
Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
     
 0.563
murB
UDP-N-acetylmuramate dehydrogenase; Cell wall formation.
  
  
 0.561
EEF84338.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
   
 
  0.553
Your Current Organism:
Borreliella spielmanii
NCBI taxonomy Id: 498742
Other names: B. spielmanii A14S, Borrelia spielmanii A14S, Borreliella spielmanii A14S
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.