STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HM1_0123Rubrerythrin; The structure is a tetramer of two-domain subunits. In each monomer, the N-terminus forms a 4-alpha-helix bundle containing the diiron-oxo site (centre I). The C-terminus forms a rubredoxin-like FeS4 domain. (187 aa)    
Predicted Functional Partners:
nuoG
Proton-translocating NADH-ubiquinone oxidoreductase 75 kd, chain g.
    
 0.875
HM1_0434
Rubredoxin.
 
  
 0.620
HM1_0548
Rubredoxin-oxygen oxidoreductase, putative; This enzyme is a homodimer consisting of two monomers, each having a flavodoxin-like domain and a Zn-beta-lactamase-like domain containing a di-iron center for the reduction of dioxygen to water. This enzyme has been characterized in Desulfovibrio gigas.
 
  
 0.607
HM1_2044
Ferric uptake regulator, fur family; Belongs to the Fur family.
  
  
 0.428
Your Current Organism:
Heliobacterium modesticaldum
NCBI taxonomy Id: 498761
Other names: H. modesticaldum Ice1, Heliobacterium modesticaldum Ice1, Heliobacterium modesticaldum str. Ice1, Heliobacterium modesticaldum strain Ice1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.