STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HM1_0230Drug resistance transporter, emrb/qaca family, putative; Belongs to the major facilitator superfamily. (516 aa)    
Predicted Functional Partners:
HM1_0228
Multidrug resistance efflux pump, putative.
 
 
 0.954
HM1_0229
Biotin-requiring domain protein.
 
 
 0.879
HM1_0227
Hlyd family secretion protein, putative; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
     
 0.775
HM1_0226
Transcription regulator, tetr family, putative.
     
 0.720
HM1_0225
Hypothetical protein.
       0.534
HM1_0231
2-nitropropane dioxygenase.
       0.444
gltB
Glutamate synthase [nadph] large chain.
     
 0.425
HM1_1500
Secretion protein hlyd, putative.
 
 
 0.422
Your Current Organism:
Heliobacterium modesticaldum
NCBI taxonomy Id: 498761
Other names: H. modesticaldum Ice1, Heliobacterium modesticaldum Ice1, Heliobacterium modesticaldum str. Ice1, Heliobacterium modesticaldum strain Ice1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.