STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HM1_0264Hypothetical protein. (149 aa)    
Predicted Functional Partners:
pilN-2
Fimbrial assembly protein piln, putative.
       0.773
HM1_0262
Hypothetical protein.
       0.773
HM1_0263
Hypothetical protein.
       0.773
xcpT
General secretion pathway protein g; Member of the prepilin-type N-terminal cleavage/methylation domain, TIGR02532.
       0.714
HM1_0258
Type ii/iv secretion protein.
       0.648
HM1_0259
Type ii secretion system f domain protein.
       0.648
HM1_0265
Pilin assembly protein, putative; Member of prepilin-type N-terminal cleavage/methylation domain, TIGR02532.
       0.623
HM1_0266
Hypothetical protein.
       0.530
HM1_0257
Hypothetical protein.
       0.437
HM1_0256
Type iv pilus assembly protein pilm.
       0.434
Your Current Organism:
Heliobacterium modesticaldum
NCBI taxonomy Id: 498761
Other names: H. modesticaldum Ice1, Heliobacterium modesticaldum Ice1, Heliobacterium modesticaldum str. Ice1, Heliobacterium modesticaldum strain Ice1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.