STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HM1_0267Conserved hypothetical protein. (102 aa)    
Predicted Functional Partners:
HM1_1199
Amidophosphoribosyltransferase, putative.
  
  
 0.830
HM1_0268
Modulator of DNA gyrase, putative.
       0.723
HM1_0265
Pilin assembly protein, putative; Member of prepilin-type N-terminal cleavage/methylation domain, TIGR02532.
  
    0.596
HM1_0259
Type ii secretion system f domain protein.
  
  
 0.560
HM1_0258
Type ii/iv secretion protein.
  
    0.554
HM1_0266
Hypothetical protein.
       0.547
xcpT
General secretion pathway protein g; Member of the prepilin-type N-terminal cleavage/methylation domain, TIGR02532.
  
    0.518
HM1_1198
Conserved hypothetical protein.
  
  
 0.509
HM1_0252
Type ii secretory pathway protein; Matches prepilin-type N-terminal cleavage/methylation domain, TIGR02532, and prokaryotic N-terminal methylation motif PFAM, PF07963.
  
    0.484
HM1_1200
Conserved hypothetical protein.
 
    0.462
Your Current Organism:
Heliobacterium modesticaldum
NCBI taxonomy Id: 498761
Other names: H. modesticaldum Ice1, Heliobacterium modesticaldum Ice1, Heliobacterium modesticaldum str. Ice1, Heliobacterium modesticaldum strain Ice1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.