STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HM1_0339Glycosyltransferase, group 1 family protein, putative. (400 aa)    
Predicted Functional Partners:
HM1_0338
Hypothetical protein.
 
  
 0.857
HM1_0337
Hypothetical protein.
       0.661
HM1_0340
Lysm domain protein.
       0.642
cotS
Putative spore coat protein s, putative.
 
  
 0.642
HM1_0341
Hypothetical protein.
       0.617
algA
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
  
 0.568
HM1_1228
Glycosyl transferase, group 2 family protein, putative.
  
 0.556
HM1_1233
Glycosyl transferase, group 2 family protein, putative.
  
 0.541
HM1_0332
Hypothetical protein.
  
  
 0.527
HM1_1152
D,d-heptose 1,7-bisphosphate phosphatase subfamily, putative; Member of histidinol-phosphate phosphatase family domain, TIGR01656, and hydrolase, HAD-superfamily, subfamily IIIA domain, TIGR01662.
 
 
 0.518
Your Current Organism:
Heliobacterium modesticaldum
NCBI taxonomy Id: 498761
Other names: H. modesticaldum Ice1, Heliobacterium modesticaldum Ice1, Heliobacterium modesticaldum str. Ice1, Heliobacterium modesticaldum strain Ice1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.