STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HM1_0577Hypothetical protein. (194 aa)    
Predicted Functional Partners:
HM1_0579
Hypothetical protein.
 
     0.897
dam
D12 class n6 adenine-specific DNA methyltransferase superfamily.
 
     0.896
HM1_0578
Conserved hypothetical protein; Member of the S-layer homology domain, PF00395, and the PKD domain, PF00801.
 
     0.883
HM1_0575
Hypothetical protein.
       0.815
spoVT
Stage v sporulation protein t, putative.
       0.815
comC
Type iv prepilin-like proteins leader peptide-processing enzyme.
 
     0.808
HM1_0586
Conserved hypothetical protein.
 
     0.788
HM1_0585
Conserved hypothetical protein.
 
     0.768
HM1_0588
Hypothetical protein.
 
     0.764
HM1_0592
Hypothetical protein.
 
     0.764
Your Current Organism:
Heliobacterium modesticaldum
NCBI taxonomy Id: 498761
Other names: H. modesticaldum Ice1, Heliobacterium modesticaldum Ice1, Heliobacterium modesticaldum str. Ice1, Heliobacterium modesticaldum strain Ice1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.