Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HM1_2228 | HM1_2230 | HM1_2228 | HM1_2230 | Flagellar hook capping protein, putative. | Flagellar hook protein. | 0.993 |
HM1_2228 | flgB | HM1_2228 | HM1_2218 | Flagellar hook capping protein, putative. | Flagellar basal-body rod protein flgb, putative; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. | 0.995 |
HM1_2228 | flgC | HM1_2228 | HM1_2219 | Flagellar hook capping protein, putative. | Flagellar basal-body rod protein flgc, putative; Belongs to the flagella basal body rod proteins family. | 0.993 |
HM1_2228 | flgK | HM1_2228 | HM1_1205 | Flagellar hook capping protein, putative. | Flagellar hook-associated protein flgk, putative; Belongs to the flagella basal body rod proteins family. | 0.974 |
HM1_2228 | fliC | HM1_2228 | HM1_1210 | Flagellar hook capping protein, putative. | Flagellin protein flic; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.925 |
HM1_2228 | fliD | HM1_2228 | HM1_1211 | Flagellar hook capping protein, putative. | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.878 |
HM1_2228 | fliG | HM1_2228 | HM1_2222 | Flagellar hook capping protein, putative. | Flagellar motor switch protein flig. | 0.978 |
HM1_2228 | fliM | HM1_2228 | HM1_2233 | Flagellar hook capping protein, putative. | Flagellar motor switch protein flim. | 0.976 |
HM1_2228 | fliS | HM1_2228 | HM1_1213 | Flagellar hook capping protein, putative. | Flagellar protein flis. | 0.917 |
HM1_2228 | fliS-2 | HM1_2228 | HM1_1251 | Flagellar hook capping protein, putative. | Flagellar protein flis. | 0.839 |
HM1_2230 | HM1_2228 | HM1_2230 | HM1_2228 | Flagellar hook protein. | Flagellar hook capping protein, putative. | 0.993 |
HM1_2230 | flgB | HM1_2230 | HM1_2218 | Flagellar hook protein. | Flagellar basal-body rod protein flgb, putative; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. | 0.994 |
HM1_2230 | flgC | HM1_2230 | HM1_2219 | Flagellar hook protein. | Flagellar basal-body rod protein flgc, putative; Belongs to the flagella basal body rod proteins family. | 0.994 |
HM1_2230 | flgK | HM1_2230 | HM1_1205 | Flagellar hook protein. | Flagellar hook-associated protein flgk, putative; Belongs to the flagella basal body rod proteins family. | 0.982 |
HM1_2230 | fliC | HM1_2230 | HM1_1210 | Flagellar hook protein. | Flagellin protein flic; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.950 |
HM1_2230 | fliD | HM1_2230 | HM1_1211 | Flagellar hook protein. | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.900 |
HM1_2230 | fliG | HM1_2230 | HM1_2222 | Flagellar hook protein. | Flagellar motor switch protein flig. | 0.988 |
HM1_2230 | fliM | HM1_2230 | HM1_2233 | Flagellar hook protein. | Flagellar motor switch protein flim. | 0.984 |
HM1_2230 | fliS | HM1_2230 | HM1_1213 | Flagellar hook protein. | Flagellar protein flis. | 0.895 |
HM1_2230 | fliS-2 | HM1_2230 | HM1_1251 | Flagellar hook protein. | Flagellar protein flis. | 0.814 |
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