STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HM1_1255Hypothetical protein. (1351 aa)    
Predicted Functional Partners:
HM1_1253
Conserved hypothetical protein.
 
     0.893
HM1_1254
Flagellar biosynthesis protein, putative.
 
     0.815
fliS-2
Flagellar protein flis.
 
     0.784
HM1_1348
Coat f domain family, putative.
  
     0.743
HM1_1473
Conserved hypothetical protein.
  
     0.735
scpA
Segregation and condensation protein a; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
  
 
 0.694
HM1_1855
Conserved domain protein.
  
     0.553
HM1_2175
4-oxalocrotonate tautomerase family enzyme.
  
     0.553
HM1_1252
Conserved hypothetical protein.
       0.489
HM1_0648
Sodium bile acid symporter family, ybas, putative.
  
   
 0.456
Your Current Organism:
Heliobacterium modesticaldum
NCBI taxonomy Id: 498761
Other names: H. modesticaldum Ice1, Heliobacterium modesticaldum Ice1, Heliobacterium modesticaldum str. Ice1, Heliobacterium modesticaldum strain Ice1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.