STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HM1_1856Conserved hypothetical protein; Member of S-layer homology domain, PF00395. (1172 aa)    
Predicted Functional Partners:
cbiQ-3
Cobalt transport protein, cbiq putative.
 
    0.862
HM1_1860
Conserved membrane protein.
 
     0.789
HM1_1131
Conserved hypothetical protein, possible surrface layer glycoprotein.
 
  
 0.782
HM1_1130
Copper amine oxidase-like protein, putative.
 
  
 0.779
HM1_1859
Abc-type cobalt transport system, ATPase component; Containing two conserved CbiO domain1 regions.
 
     0.760
HM1_1128
Copper amine oxidase domain protein, putative.
  
  
 0.757
HM1_1136
Copper amine oxidase domain protein, putative.
  
   
 0.734
HM1_2538
S-layer protein, putative.
 
   
 0.726
HM1_1857
Conserved hypothetical protein.
      
0.723
HM1_2860
Subtilisin-like protease.
 
 
 0.722
Your Current Organism:
Heliobacterium modesticaldum
NCBI taxonomy Id: 498761
Other names: H. modesticaldum Ice1, Heliobacterium modesticaldum Ice1, Heliobacterium modesticaldum str. Ice1, Heliobacterium modesticaldum strain Ice1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.