STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HM1_2000Conserved hypothetical protein, putative membrane protein. (234 aa)    
Predicted Functional Partners:
HM1_3144
Geranylgeranylglyceryl phosphate synthase, putative; PcrB family protein; GGGP synthase; possible member of prenyltransferases that transfer isoprenoid groups to nonisoprenoid acceptors; functions in form GGGP from glycerol-1-phosphate (G-1-P) and geranylgeranyl pyrophosphate (GGPP); important in lipid meta.
  
     0.774
HM1_1309
Acetyltransferase; May contain bacterial transferase hexapeptide (three repeats).
 
     0.769
HM1_1999
Serine/threonine protein phosphatase.
       0.757
HM1_1997
Conserved hypothetical protein.
       0.668
HM1_1998
Conserved hypothetical protein; Similar to NIF-3 related protein; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.
       0.668
acuA
Acetoin utilization protein, subunit a.
  
     0.623
acsA
Acetyl-coenzyme a synthetase.
  
     0.451
Your Current Organism:
Heliobacterium modesticaldum
NCBI taxonomy Id: 498761
Other names: H. modesticaldum Ice1, Heliobacterium modesticaldum Ice1, Heliobacterium modesticaldum str. Ice1, Heliobacterium modesticaldum strain Ice1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.