Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
HM1_2007Heterodisulfide reductase, putative. (293 aa)    
Predicted Functional Partners:
HM1_2006
4fe-4S ferredoxin, iron-sulfur binding protein, putative.
 0.999
hdrA
Heterodisulfide reductase, subunit a.
 
 0.999
mvhD
Methyl-viologen-reducing hydrogenase domain protein, subunit d, putative.
 
 0.998
HM1_2010
4fe-4S ferredoxin, iron-sulfur binding protein, putative.
 
 0.995
HM1_2011
4fe-4S ferredoxin, iron-sulfur binding protein, putative.
 
 
 0.890
HM1_2012
Nad/fad binding oxidoreductase.
 
  
 0.809
HM1_2005
Hypothetical protein.
       0.568
HM1_0206
Uptake [ni/fe] hydrogenase, large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
  
 
 0.533
HM1_1052
Ni/fe-hydrogenase, large subunit domain protein, putative.
  
 
 0.533
HM1_1479
Uptake [ni/fe] hydrogenase, large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
  
 
 0.533
Your Current Organism:
Heliobacterium modesticaldum
NCBI taxonomy Id: 498761
Other names: H. modesticaldum Ice1, Heliobacterium modesticaldum Ice1, Heliobacterium modesticaldum str. Ice1, Heliobacterium modesticaldum strain Ice1
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